Documentation will be updated after Scripts Organizer version 3 is released.
Since Scripts Organizer is WordPress native-oriented you can manage scripts the same as any other post or page. In the Scripts list, you can sort them by title or date.
If you open Script you can also apply WordPress native tags and group them together. Tags are also visible in Scripts List and you can narrow the list by selecting the tag.
Besides tags, we also offer a description box where you can write what each script does. That will speed you in long run as if you come back after some time maybe the title will not be enough and you don't need to open the script to dive into the code to understand what it does.